Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9215_24170 | Not Available | Negative | 4873603 - 4873875 | 10352.5 |
| helix-turn-helix domain-containing protein | C9215_24175 | Not Available | Positive | 4873984 - 4874385 | 15302.5 |
| antitoxin | C9215_24180 | Not Available | Positive | 4874413 - 4874604 | 7026.17 |
| type ii toxin-antitoxin system rele/pare family toxin | C9215_24185 | Not Available | Positive | 4874604 - 4874891 | 10979.5 |
| hypothetical protein | C9215_24190 | Not Available | Positive | 4874893 - 4875111 | 8130.42 |
| duf1391 domain-containing protein | C9215_24195 | Not Available | Positive | 4875169 - 4875324 | 5792.67 |
| hypothetical protein | C9215_24200 | Not Available | Positive | 4875466 - 4875855 | 15160.1 |
| hypothetical protein | C9215_24205 | Not Available | Negative | 4876042 - 4876227 | 6885.18 |
| hypothetical protein | C9215_24210 | Not Available | Negative | 4876229 - 4876534 | 11084.6 |
| hypothetical protein | C9215_24215 | Not Available | Negative | 4876764 - 4877036 | 10398.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





