Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9215_23530 | Not Available | Negative | 4795549 - 4796064 | 19676.6 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | C9215_23535 | Not Available | Negative | 4796305 - 4797351 | 37226.2 |
| amp nucleosidase | C9215_23540 | Not Available | Positive | 4797558 - 4797665 | 4002.93 |
| cytotoxin | C9215_23545 | Not Available | Negative | 4797632 - 4798459 | 32338.8 |
| cytotoxin | C9215_23550 | Not Available | Negative | 4798465 - 4799766 | 50209.8 |
| t3ss effector protein nlee | C9215_23560 | Not Available | Negative | 4801641 - 4802315 | 26059.2 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9215_23565 | Not Available | Negative | 4802364 - 4803353 | 37644.7 |
| shet2/espl2 family type iii secretion system effector toxin | C9215_23575 | Not Available | Negative | 4803961 - 4805610 | 62159.2 |
| hypothetical protein | C9215_23580 | Not Available | Positive | 4805691 - 4805885 | 7755.58 |
| ail/lom family protein | C9215_23600 | Not Available | Positive | 4808590 - 4809138 | 20384.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





