Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein 2 | C9215_23245 | Not Available | Negative | 4751073 - 4752470 | 48155.7 |
| flic/fljb family flagellin | C9215_23250 | Not Available | Positive | 4752736 - 4754493 | 59956.8 |
| rna polymerase sigma factor flia | C9215_23255 | Not Available | Positive | 4754813 - 4755532 | 27522.8 |
| flagella biosynthesis regulatory protein fliz | C9215_23260 | Not Available | Positive | 4755578 - 4756129 | 21543.9 |
| cystine abc transporter substrate-binding protein | C9215_23265 | Not Available | Positive | 4756217 - 4757017 | 29054.9 |
| d-cysteine desulfhydrase | C9215_23270 | Not Available | Positive | 4757122 - 4758108 | 35183.5 |
| cystine abc transporter permease | C9215_23275 | Not Available | Positive | 4758123 - 4758791 | 24832.8 |
| l-cystine abc transporter atp-binding protein yecc | C9215_23280 | Not Available | Positive | 4758788 - 4759540 | 27677.8 |
| transcriptional regulator sdia | C9215_23285 | Not Available | Positive | 4759770 - 4760492 | 28118.9 |
| duf2594 family protein | C9215_23290 | Not Available | Negative | 4760560 - 4760784 | 8239.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





