Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphenol oxidase | C9215_22680 | Not Available | Negative | 4668802 - 4669533 | 26411.3 |
| ribosomal large subunit pseudouridine synthase d | C9215_22685 | Not Available | Negative | 4669530 - 4670510 | 37123.9 |
| outer membrane protein assembly factor bamd | C9215_22690 | Not Available | Positive | 4670645 - 4671382 | 27830.9 |
| ribosome-associated inhibitor a | C9215_22695 | Not Available | Positive | 4671653 - 4671994 | 12785.3 |
| hypothetical protein | C9215_22700 | Not Available | Positive | 4672098 - 4672145 | 1912.35 |
| p-protein | C9215_22705 | Not Available | Positive | 4672244 - 4673404 | 43113.9 |
| bifunctional chorismate mutase/prephenate dehydrogenase | C9215_22710 | Not Available | Negative | 4673447 - 4674568 | 42000.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | C9215_22715 | Not Available | Negative | 4674579 - 4675649 | 38762.2 |
| duf2799 domain-containing protein | C9215_22720 | Not Available | Positive | 4675859 - 4676224 | 13174.3 |
| duf4154 domain-containing protein | C9215_22725 | Not Available | Positive | 4676374 - 4676892 | 18979.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





