Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific atp synthase flii | C9215_22135 | Not Available | Negative | 4567747 - 4569120 | 49318.6 |
| flagellar assembly protein flih | C9215_22140 | Not Available | Negative | 4569182 - 4569868 | 25059.6 |
| flagellar motor switch protein flig | C9215_22145 | Not Available | Negative | 4569861 - 4570856 | 36778.2 |
| flagellar basal body m-ring protein flif | C9215_22150 | Not Available | Negative | 4570849 - 4572507 | 60712.8 |
| flagellar hook-basal body complex protein flie | C9215_22155 | Not Available | Positive | 4572722 - 4573036 | 11127.5 |
| integrase | C9215_22160 | Not Available | Negative | 4572956 - 4573207 | 9855.89 |
| leucine-rich repeat domain-containing protein | C9215_22165 | Not Available | Positive | 4573385 - 4574108 | 27326.5 |
| hypothetical protein | C9215_22170 | Not Available | Negative | 4574109 - 4574466 | 13082.5 |
| Trna-arg | Not Available | Not Available | Positive | 4574636 - 4574712 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4574813 - 4574888 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





