Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | C9215_22035 | Not Available | Positive | 4553357 - 4554775 | 53467.8 |
| very short patch repair endonuclease | C9215_22040 | Not Available | Positive | 4554756 - 4555226 | 18043.7 |
| drug/metabolite exporter yeda | C9215_22045 | Not Available | Negative | 4555215 - 4556135 | 32196.0 |
| duf808 domain-containing protein | C9215_22050 | Not Available | Positive | 4556308 - 4557225 | 32162.8 |
| duf2158 domain-containing protein | C9215_22055 | Not Available | Positive | 4557304 - 4557486 | 6678.85 |
| cellulose synthesis regulatory protein | C9215_22060 | Not Available | Positive | 4557657 - 4559351 | 64290.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | C9215_22065 | Not Available | Negative | 4559348 - 4560163 | 30472.1 |
| stress-induced protein yodd | C9215_22070 | Not Available | Negative | 4560461 - 4560688 | 8579.66 |
| hypothetical protein | C9215_22075 | Not Available | Positive | 4560676 - 4560864 | 7014.32 |
| protein dsrb | C9215_22080 | Not Available | Positive | 4560797 - 4561039 | 9071.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





