Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excisionase | C9215_21725 | Not Available | Positive | 4504173 - 4504409 | 8873.95 |
| spermidine/putrescine abc transporter permease potb | C9215_21915 | Not Available | Positive | 4533015 - 4533878 | 32353.4 |
| hypothetical protein | C9215_21920 | Not Available | Positive | 4533909 - 4534121 | 8267.11 |
| type iii secretion protein gogb | C9215_21925 | Not Available | Positive | 4534242 - 4535603 | 51008.8 |
| secretion protein espo | C9215_21930 | Not Available | Positive | 4535664 - 4535939 | 10257.3 |
| nleb | C9215_21935 | Not Available | Negative | 4536019 - 4536144 | 5129.03 |
| hypothetical protein | C9215_21950 | Not Available | Positive | 4537680 - 4537871 | 7795.31 |
| duf4765 family protein | C9215_21955 | Not Available | Negative | 4538248 - 4540296 | 77308.1 |
| tir-cytoskeleton coupling protein tccp | C9215_21960 | Not Available | Negative | 4540297 - 4540669 | 13555.0 |
| type iii secretion system effector adp-ribosyltransferase espj | C9215_21965 | Not Available | Negative | 4540994 - 4541647 | 24670.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





