Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase dacd | C9215_21140 | Not Available | Positive | 4418054 - 4419220 | 43318.5 |
| dna gyrase inhibitor sbmc | C9215_21145 | Not Available | Positive | 4419339 - 4419812 | 18062.3 |
| fusc family protein | C9215_21150 | Not Available | Positive | 4420011 - 4421069 | 39899.7 |
| duf496 family protein | C9215_21155 | Not Available | Positive | 4421241 - 4421570 | 12778.5 |
| ethanolamine utilization protein | C9215_21160 | Not Available | Negative | 4421671 - 4421853 | 6488.86 |
| duf957 domain-containing protein | C9215_21170 | Not Available | Negative | 4422342 - 4422455 | 4213.22 |
| hypothetical protein | C9215_21175 | Not Available | Negative | 4422468 - 4422662 | 6959.16 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9215_21185 | Not Available | Negative | 4423121 - 4423489 | 13610.2 |
| duf987 domain-containing protein | C9215_21190 | Not Available | Negative | 4423563 - 4423784 | 8411.2 |
| dna repair protein radc | C9215_21195 | Not Available | Negative | 4423847 - 4424323 | 17689.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





