Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | C9215_21090 | Not Available | Negative | 4408642 - 4409946 | 46076.9 |
| atp phosphoribosyltransferase | C9215_21095 | Not Available | Negative | 4409952 - 4410851 | 33353.8 |
| his operon leader peptide | C9215_21100 | Not Available | Negative | 4410997 - 4411047 | 2072.42 |
| sdr family oxidoreductase | C9215_21105 | Not Available | Positive | 4411473 - 4412297 | 29681.7 |
| lysr family transcriptional regulator | C9215_21110 | Not Available | Positive | 4412343 - 4413272 | 34213.0 |
| membrane protein yoei | C9215_21115 | Not Available | Positive | 4413487 - 4413549 | 2241.66 |
| low-affinity putrescine importer plap | C9215_21120 | Not Available | Positive | 4413539 - 4414897 | 49540.5 |
| yeee/yede family protein | C9215_21125 | Not Available | Positive | 4415076 - 4416134 | 38012.6 |
| hypothetical protein | C9215_21130 | Not Available | Positive | 4416148 - 4416375 | 8092.61 |
| exodeoxyribonuclease i | C9215_21135 | Not Available | Negative | 4416418 - 4417845 | 54503.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





