Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent phosphogluconate dehydrogenase | C9215_21040 | Not Available | Positive | 4399777 - 4401183 | 51480.2 |
| udp-glucose 6-dehydrogenase | C9215_21045 | Not Available | Positive | 4401432 - 4402598 | 43715.3 |
| lps o-antigen chain length determinant protein wzzb | C9215_21050 | Not Available | Positive | 4402744 - 4403721 | 36293.7 |
| hypothetical protein | C9215_21055 | Not Available | Negative | 4403630 - 4403821 | 6793.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | C9215_21060 | Not Available | Negative | 4403818 - 4404429 | 22842.2 |
| imidazole glycerol phosphate synthase subunit hisf | C9215_21065 | Not Available | Negative | 4404423 - 4405199 | 28456.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C9215_21070 | Not Available | Negative | 4405181 - 4405918 | 26032.2 |
| imidazole glycerol phosphate synthase subunit hish | C9215_21075 | Not Available | Negative | 4405918 - 4406508 | 21596.1 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | C9215_21080 | Not Available | Negative | 4406508 - 4407575 | 40292.4 |
| histidinol-phosphate transaminase | C9215_21085 | Not Available | Negative | 4407575 - 4408645 | 39390.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





