Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | C9215_20935 | Not Available | Positive | 4379489 - 4379956 | 17597.9 |
| sam-dependent methyltransferase | C9215_20940 | Not Available | Negative | 4379953 - 4380675 | 27291.7 |
| hydroxyacylglutathione hydrolase | C9215_20945 | Not Available | Positive | 4380709 - 4381464 | 28435.9 |
| murein transglycosylase d | C9215_20950 | Not Available | Positive | 4381536 - 4382894 | 49393.3 |
| sam-dependent methyltransferase | C9215_20955 | Not Available | Negative | 4382942 - 4383712 | 28258.4 |
| endonuclease/exonuclease/phosphatase family protein | C9215_20960 | Not Available | Negative | 4383790 - 4384590 | 29993.4 |
| lysr family transcriptional regulator | C9215_20965 | Not Available | Positive | 4384831 - 4385745 | 33724.7 |
| 2,5-diketo-d-gluconic acid reductase b | C9215_20970 | Not Available | Negative | 4385742 - 4386545 | 29440.4 |
| Trna-asp | Not Available | Not Available | Positive | 4386708 - 4386784 | Not Available |
| o157 family o-antigen polymerase | C9215_20980 | Not Available | Positive | 4386814 - 4387797 | 37716.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





