Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| appa family phytase/histidine-type acid phosphatase | C9215_20725 | Not Available | Negative | 4334411 - 4335715 | 47339.8 |
| cytochrome bd-ii oxidase subunit cbdx | C9215_20730 | Not Available | Negative | 4335795 - 4335887 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | C9215_20735 | Not Available | Negative | 4335900 - 4337036 | 42443.3 |
| cytochrome bd-ii oxidase subunit 1 | C9215_20740 | Not Available | Negative | 4337048 - 4338592 | 58024.3 |
| hydrogenase expression/formation protein | C9215_20745 | Not Available | Negative | 4338726 - 4339583 | 31530.7 |
| hydrogenase-1 operon protein hyae | C9215_20750 | Not Available | Negative | 4339580 - 4339978 | 14950.7 |
| hydrogenase 1 maturation protease | C9215_20755 | Not Available | Negative | 4339975 - 4340562 | 21456.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | C9215_20760 | Not Available | Negative | 4340559 - 4341266 | 27598.8 |
| hydrogenase 1 large subunit | C9215_20765 | Not Available | Negative | 4341285 - 4343078 | 66286.1 |
| twin-arginine translocation signal domain-containing protein | C9215_20770 | Not Available | Negative | 4343075 - 4344193 | 40673.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





