Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | C9215_20460 | Not Available | Positive | 4282278 - 4284689 | 89810.8 |
| formate dehydrogenase subunit beta | C9215_20465 | Not Available | Positive | 4284702 - 4285586 | 32213.4 |
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | C9215_20470 | Not Available | Positive | 4285579 - 4286232 | 25370.0 |
| addiction module antidote protein, higa family | C9215_20475 | Not Available | Negative | 4286460 - 4286744 | 10313.6 |
| alcohol dehydrogenase adhp | C9215_20480 | Not Available | Negative | 4286890 - 4287900 | 35371.6 |
| nad-dependent malic enzyme | C9215_20485 | Not Available | Negative | 4288034 - 4289731 | 63136.9 |
| stationary-phase-induced ribosome-associated protein | C9215_20490 | Not Available | Negative | 4289888 - 4290025 | 5096.13 |
| protein bdm | C9215_20495 | Not Available | Negative | 4290127 - 4290342 | 7988.24 |
| osmc family peroxiredoxin | C9215_20500 | Not Available | Positive | 4290687 - 4291118 | 15119.0 |
| atp-binding cassette domain-containing protein | C9215_20505 | Not Available | Negative | 4291174 - 4292100 | 34553.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





