Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | C9215_04595 | Not Available | Negative | 1009743 - 1010186 | 16574.5 |
| cytosol aminopeptidase | C9215_04600 | Not Available | Negative | 1010540 - 1012051 | 54883.1 |
| lipopolysaccharide abc transporter permease lptf | C9215_04605 | Not Available | Positive | 1012318 - 1013418 | 40360.1 |
| lipopolysaccharide abc transporter permease lptg | C9215_04610 | Not Available | Positive | 1013418 - 1014500 | 39621.0 |
| duf853 domain-containing protein | C9215_04615 | Not Available | Negative | 1014661 - 1016163 | 54369.5 |
| nadph-dependent aldehyde reductase ahr | C9215_04620 | Not Available | Negative | 1016293 - 1017312 | 36530.0 |
| Trna-leu | Not Available | Not Available | Positive | 1017508 - 1017592 | Not Available |
| site-specific integrase | C9215_04630 | Not Available | Positive | 1017683 - 1019632 | 74027.3 |
| type iv secretion protein rhs | C9215_04635 | Not Available | Negative | 1019857 - 1019935 | 2564.06 |
| abc transporter permease | C9215_04640 | Not Available | Negative | 1020365 - 1022779 | 89390.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





