Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9215_04345 | Not Available | Negative | 954044 - 954682 | 23555.0 |
| peptidylprolyl isomerase | C9215_04350 | Not Available | Positive | 954900 - 955520 | 22217.5 |
| d-serine/d-alanine/glycine transporter | C9215_04355 | Not Available | Positive | 955829 - 957241 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | C9215_04360 | Not Available | Negative | 957286 - 957948 | 24853.1 |
| dmt family transporter | C9215_04365 | Not Available | Negative | 958056 - 959021 | 35266.7 |
| sdr family oxidoreductase | C9215_04370 | Not Available | Negative | 959129 - 959989 | 29827.3 |
| transcriptional regulator | C9215_04375 | Not Available | Positive | 960078 - 960458 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | C9215_04380 | Not Available | Negative | 960576 - 962519 | 70909.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9215_04385 | Not Available | Positive | 962709 - 963449 | 27161.3 |
| hypothetical protein | C9215_04390 | Not Available | Positive | 963661 - 964599 | 35872.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





