Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | C9214_23080 | Not Available | Negative | 4613142 - 4613942 | 29993.4 |
| lysr family transcriptional regulator | C9214_23085 | Not Available | Positive | 4614183 - 4615097 | 33708.7 |
| 2,5-didehydrogluconate reductase dkgb | C9214_23090 | Not Available | Negative | 4615094 - 4615897 | 29481.5 |
| Trna-asp | Not Available | Not Available | Positive | 4616060 - 4616136 | Not Available |
| papi protein | C9214_23300 | Not Available | Positive | 4650428 - 4650574 | 5420.66 |
| hypothetical protein | C9214_23305 | Not Available | Negative | 4650653 - 4650847 | 7755.58 |
| shet2/espl2 family type iii secretion system effector toxin | C9214_23310 | Not Available | Positive | 4650928 - 4652577 | 62149.1 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9214_23320 | Not Available | Positive | 4653185 - 4654174 | 37590.5 |
| t3ss effector protein nlee | C9214_23325 | Not Available | Positive | 4654223 - 4654897 | 26104.3 |
| lymphostatin efa1/lifa | C9214_23335 | Not Available | Positive | 4656633 - 4666304 | 365611.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





