Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee inner membrane ring protein escd | C9214_18485 | Not Available | Positive | 3745295 - 3746515 | 45226.7 |
| intimin | C9214_18490 | Not Available | Negative | 3746730 - 3749549 | 101648.0 |
| type iii secretion system lee chaperone cest | C9214_18495 | Not Available | Negative | 3749610 - 3750080 | 17721.9 |
| translocated intimin receptor tir | C9214_18500 | Not Available | Negative | 3750213 - 3751829 | 55424.1 |
| t3ss effector protein map | C9214_18505 | Not Available | Negative | 3752276 - 3752887 | 22600.2 |
| tir chaperone family protein | C9214_18510 | Not Available | Positive | 3753140 - 3753499 | 13781.4 |
| secretion protein esph | C9214_18515 | Not Available | Negative | 3753718 - 3754233 | 19561.3 |
| type iii secretion system protein sepq | C9214_18520 | Not Available | Negative | 3754264 - 3755181 | 34937.9 |
| duf1106 domain-containing protein | C9214_18525 | Not Available | Negative | 3755144 - 3755560 | 16348.6 |
| type iii secretion protein | C9214_18530 | Not Available | Negative | 3755553 - 3755873 | 12362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





