Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C9214_13645 | Not Available | Positive | 2805123 - 2805974 | 31994.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | C9214_13650 | Not Available | Positive | 2805984 - 2806364 | 14299.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | C9214_13655 | Not Available | Positive | 2806475 - 2807278 | 29716.5 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | C9214_13660 | Not Available | Positive | 2807289 - 2808077 | 28074.8 |
| 4-hydroxyphenylacetate permease | C9214_13665 | Not Available | Positive | 2808200 - 2809576 | 50552.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | C9214_13670 | Not Available | Positive | 2809586 - 2810476 | 34332.0 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | C9214_13675 | Not Available | Positive | 2810727 - 2812289 | 58867.0 |
| 4-hydroxyphenylacetate 3-monooxygenase reductase component | C9214_13680 | Not Available | Positive | 2812307 - 2812819 | 18522.7 |
| carbon starvation protein a | C9214_13685 | Not Available | Positive | 2813212 - 2815362 | 77314.5 |
| ybdd/yjix family protein | C9214_13690 | Not Available | Positive | 2815412 - 2815615 | 7729.24 |
Pathways
734 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





