Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase | C9214_13330 | Not Available | Negative | 2745047 - 2745871 | 30057.1 |
| l-rhamnose isomerase | C9214_13335 | Not Available | Negative | 2746113 - 2747372 | 47218.0 |
| rhamnulokinase | C9214_13340 | Not Available | Negative | 2747369 - 2748838 | 54059.2 |
| transcriptional activator rhas | C9214_13345 | Not Available | Positive | 2749126 - 2749962 | 32317.2 |
| rhamnose/proton symporter rhat | C9214_13355 | Not Available | Negative | 2750881 - 2751915 | 37331.1 |
| superoxide dismutase | C9214_13360 | Not Available | Positive | 2752200 - 2752820 | 23081.1 |
| 2-keto-3-deoxygluconate transporter | C9214_13365 | Not Available | Positive | 2753080 - 2754063 | 33623.3 |
| 6-n-hydroxylaminopurine resistance protein | C9214_13370 | Not Available | Positive | 2754212 - 2754886 | 25344.1 |
| two-component sensor histidine kinase | C9214_13375 | Not Available | Negative | 2754992 - 2756365 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | C9214_13380 | Not Available | Negative | 2756362 - 2757060 | 26313.7 |
Pathways
887 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





