Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tata | C9214_13030 | Not Available | Positive | 2679250 - 2679519 | 9664.5 |
| sec-independent protein translocase subunit tatb | C9214_13035 | Not Available | Positive | 2679523 - 2680038 | 18421.8 |
| sec-independent protein translocase subunit tatc | C9214_13040 | Not Available | Positive | 2680041 - 2680817 | 28877.9 |
| tat-linked quality control protein tatd | C9214_13045 | Not Available | Positive | 2680859 - 2681641 | 29061.7 |
| transcription/translation regulatory transformer protein rfah | C9214_13050 | Not Available | Negative | 2681638 - 2682126 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C9214_13055 | Not Available | Positive | 2682293 - 2683786 | 55606.8 |
| nad(p)h-flavin reductase | C9214_13060 | Not Available | Positive | 2683832 - 2684533 | 26243.5 |
| acetyl-coa c-acyltransferase fada | C9214_13065 | Not Available | Negative | 2684725 - 2685888 | 40848.6 |
| fatty acid oxidation complex subunit alpha fadb | C9214_13070 | Not Available | Negative | 2685898 - 2688087 | 79627.5 |
| xaa-pro dipeptidase | C9214_13075 | Not Available | Positive | 2688277 - 2689608 | 50178.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





