Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase rep | C9214_12730 | Not Available | Positive | 2617896 - 2619917 | 77134.7 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | C9214_12735 | Not Available | Negative | 2619964 - 2621448 | 54888.5 |
| atp-dependent rna helicase rhlb | C9214_12740 | Not Available | Negative | 2621582 - 2622847 | 47128.7 |
| thiol reductase thioredoxin | C9214_12745 | Not Available | Positive | 2622978 - 2623307 | 11807.2 |
| rho operon leader peptide rhol | C9214_12750 | Not Available | Positive | 2623448 - 2623549 | 3750.4 |
| transcription termination factor rho | C9214_12755 | Not Available | Positive | 2623634 - 2624893 | 47007.1 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | C9214_12760 | Not Available | Positive | 2625133 - 2626236 | 40959.7 |
| lps biosynthesis protein | C9214_12765 | Not Available | Positive | 2626248 - 2627294 | 39491.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C9214_12770 | Not Available | Positive | 2627350 - 2628480 | 42235.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | C9214_12775 | Not Available | Positive | 2628477 - 2629739 | 45903.4 |
Pathways
736 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





