Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | C9214_12580 | Not Available | Positive | 2583772 - 2585019 | 46619.5 |
| phenylalanine transporter | C9214_12585 | Not Available | Negative | 2585087 - 2586463 | 50678.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | C9214_12590 | Not Available | Negative | 2586565 - 2589708 | 114744.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | C9214_12595 | Not Available | Negative | 2589720 - 2590943 | 44398.5 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | C9214_12600 | Not Available | Negative | 2590959 - 2591291 | 12251.9 |
| efflux transporter outer membrane subunit | C9214_12605 | Not Available | Negative | 2591315 - 2592697 | 50684.9 |
| copper response regulator transcription factor cusr | C9214_12610 | Not Available | Positive | 2592854 - 2593537 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9214_12615 | Not Available | Positive | 2593527 - 2594975 | 54135.7 |
| type vi secretion system tip protein vgrg | C9214_12620 | Not Available | Positive | 2595712 - 2597613 | 71438.0 |
| duf1795 domain-containing protein | C9214_12625 | Not Available | Positive | 2597641 - 2598102 | 17319.4 |
Pathways
564 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





