Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0439 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267388 bp
Thymine Count
1267027 bp
Guanine Count
1288249 bp
Cytosine Count
1285886 bp
Genome Length
5120665 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | C9214_12325 | Not Available | Positive | 2531335 - 2531718 | 13796.2 |
| cold-shock protein cspe | C9214_12330 | Not Available | Negative | 2531773 - 2531982 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | C9214_12335 | Not Available | Negative | 2532157 - 2532717 | 21770.6 |
| anaerobic c4-dicarboxylate transporter dcuc | C9214_12340 | Not Available | Positive | 2533306 - 2534691 | 48415.3 |
| two-component response regulator | C9214_12345 | Not Available | Negative | 2534732 - 2535412 | 25454.9 |
| sensor histidine kinase dpib | C9214_12350 | Not Available | Negative | 2535381 - 2537039 | 61659.7 |
| [citrate (pro-3s)-lyase] ligase | C9214_12355 | Not Available | Positive | 2537419 - 2538477 | 40079.5 |
| citrate lyase acyl carrier protein | C9214_12360 | Not Available | Positive | 2538492 - 2538788 | 10689.9 |
| citrate lyase subunit beta | C9214_12365 | Not Available | Positive | 2538785 - 2539693 | 33111.6 |
| citrate lyase subunit alpha | C9214_12370 | Not Available | Positive | 2539704 - 2541236 | 55175.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





