Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0438 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1201139 bp
Thymine Count
1202681 bp
Guanine Count
1219253 bp
Cytosine Count
1230952 bp
Genome Length
4862979 bp
Protein-coding Genes
4391 genes
Non-Coding Genes
204 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | C9213_01955 | Not Available | Negative | 392484 - 393461 | 35072.8 |
| transcription antitermination factor nusb | C9213_01960 | Not Available | Negative | 393539 - 393958 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9213_01965 | Not Available | Negative | 393978 - 394448 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9213_01970 | Not Available | Negative | 394537 - 395640 | 40340.7 |
| transcriptional regulator nrdr | C9213_01975 | Not Available | Negative | 395644 - 396093 | 17229.9 |
| duf3251 domain-containing protein | C9213_01980 | Not Available | Positive | 396244 - 396783 | 19561.5 |
| nucleoside-specific channel-forming protein tsx | C9213_01985 | Not Available | Positive | 397082 - 397966 | 33590.6 |
| hnh nuclease family protein | C9213_01990 | Not Available | Negative | 398143 - 398490 | 13364.7 |
| protein translocase subunit secf | C9213_01995 | Not Available | Negative | 398619 - 399590 | 35384.6 |
| protein translocase subunit secd | C9213_02000 | Not Available | Negative | 399601 - 401448 | 66636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





