Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0438 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1201139 bp
Thymine Count
1202681 bp
Guanine Count
1219253 bp
Cytosine Count
1230952 bp
Genome Length
4862979 bp
Protein-coding Genes
4391 genes
Non-Coding Genes
204 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 79147 - 79278 | Not Available |
| multidrug resistance outer membrane protein mdtq | C9213_00540 | Not Available | Negative | 78671 - 80197 | 55624.2 |
| protein yohp | C9213_00545 | Not Available | Positive | 80331 - 80414 | 3092.28 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 81051 - 81427 | Not Available |
| trna dihydrouridine(16) synthase dusc | C9213_00550 | Not Available | Negative | 80787 - 81734 | 35201.5 |
| hypothetical protein | C9213_00555 | Not Available | Positive | 81973 - 82371 | 14579.6 |
| cidb/lrgb family autolysis modulator | C9213_00560 | Not Available | Positive | 82368 - 83063 | 24471.1 |
| cytidine deaminase | C9213_00565 | Not Available | Positive | 83193 - 84077 | 31541.6 |
| protein sana | C9213_00570 | Not Available | Positive | 84227 - 84946 | 27288.5 |
| duf2542 family protein | C9213_00575 | Not Available | Positive | 84949 - 85188 | 9264.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





