Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0427 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1310908 bp
Thymine Count
1315685 bp
Guanine Count
1348365 bp
Cytosine Count
1325084 bp
Genome Length
5310772 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
306 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9202_15955 | Not Available | Negative | 3268495 - 3268836 | 12553.0 |
| xylulokinase | C9202_15960 | Not Available | Negative | 3269005 - 3270459 | 52681.4 |
| xylose isomerase | C9202_15965 | Not Available | Negative | 3270531 - 3271853 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | C9202_15970 | Not Available | Positive | 3272219 - 3273211 | 35722.1 |
| d-xylose abc transporter atp-binding protein | C9202_15975 | Not Available | Positive | 3273289 - 3274830 | 56459.9 |
| xylose abc transporter permease | C9202_15980 | Not Available | Positive | 3274808 - 3275989 | 41033.5 |
| xylr family transcriptional regulator | C9202_15985 | Not Available | Positive | 3276067 - 3277245 | 44885.7 |
| protein bax | C9202_15990 | Not Available | Negative | 3277353 - 3278177 | 30869.3 |
| alpha-amylase | C9202_15995 | Not Available | Positive | 3278497 - 3280527 | 75731.6 |
| valine--pyruvate transaminase | C9202_16000 | Not Available | Positive | 3280705 - 3281958 | 46689.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





