Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0427 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1310908 bp
Thymine Count
1315685 bp
Guanine Count
1348365 bp
Cytosine Count
1325084 bp
Genome Length
5310772 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
306 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | C9202_11850 | Not Available | Positive | 2485054 - 2485386 | 11887.9 |
| protein translocase subunit secd | C9202_11855 | Not Available | Positive | 2485414 - 2487261 | 66636.3 |
| protein translocase subunit secf | C9202_11860 | Not Available | Positive | 2487272 - 2488243 | 35384.6 |
| hnh nuclease family protein | C9202_11865 | Not Available | Positive | 2488372 - 2488719 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C9202_11870 | Not Available | Negative | 2488896 - 2489780 | 33590.6 |
| duf3251 domain-containing protein | C9202_11875 | Not Available | Negative | 2490079 - 2490618 | 19560.6 |
| transcriptional regulator nrdr | C9202_11880 | Not Available | Positive | 2490769 - 2491218 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9202_11885 | Not Available | Positive | 2491222 - 2492325 | 40429.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9202_11890 | Not Available | Positive | 2492414 - 2492884 | 16157.4 |
| transcription antitermination factor nusb | C9202_11895 | Not Available | Positive | 2492904 - 2493323 | 15689.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





