Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0427 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1310908 bp
Thymine Count
1315685 bp
Guanine Count
1348365 bp
Cytosine Count
1325084 bp
Genome Length
5310772 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
306 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator cadc | C9202_09630 | Not Available | Positive | 2020090 - 2021628 | 57849.2 |
| hypothetical protein | C9202_09635 | Not Available | Negative | 2021519 - 2021764 | 9460.51 |
| cadaverine/lysine antiporter | C9202_09640 | Not Available | Positive | 2021994 - 2023328 | 46667.8 |
| lysine decarboxylase cada | C9202_09645 | Not Available | Positive | 2023408 - 2025555 | 81264.7 |
| dipeptide and tripeptide permease c | C9202_09650 | Not Available | Positive | 2025614 - 2027071 | 53043.7 |
| lysine--trna ligase heat inducible | C9202_09655 | Not Available | Positive | 2027308 - 2028825 | 57829.9 |
| ghot/ortt family toxin | C9202_09660 | Not Available | Negative | 2028944 - 2029117 | 6555.44 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | C9202_09665 | Not Available | Negative | 2029145 - 2029441 | 11468.6 |
| n-acetyltransferase | C9202_09670 | Not Available | Negative | 2029668 - 2029940 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | C9202_09675 | Not Available | Negative | 2029952 - 2030182 | 8650.47 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





