Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0426 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1374360 bp
Thymine Count
1382395 bp
Guanine Count
1411152 bp
Cytosine Count
1407900 bp
Genome Length
5588627 bp
Protein-coding Genes
5036 genes
Non-Coding Genes
528 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2680564 - 2680639 | Not Available |
| g/u mismatch-specific dna glycosylase | C9201_13245 | Not Available | Positive | 2680764 - 2681270 | 18674.5 |
| rna polymerase sigma factor rpod | C9201_13250 | Not Available | Negative | 2681349 - 2683190 | 70211.2 |
| dna primase | C9201_13255 | Not Available | Negative | 2683385 - 2685130 | 65568.5 |
| 30s ribosomal protein s21 | C9201_13260 | Not Available | Negative | 2685241 - 2685456 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C9201_13265 | Not Available | Positive | 2685694 - 2686707 | 36009.5 |
| l-tartrate/succinate antiporter | C9201_13270 | Not Available | Negative | 2686750 - 2688213 | 52910.6 |
| l(+)-tartrate dehydratase subunit beta | C9201_13275 | Not Available | Negative | 2688262 - 2688867 | 22680.8 |
| l+-tartrate dehydratase subunit alpha | C9201_13280 | Not Available | Negative | 2688864 - 2689775 | 32735.5 |
| transcriptional activator ttdr | C9201_13285 | Not Available | Positive | 2689982 - 2690914 | 35316.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




