Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0426 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1374360 bp
Thymine Count
1382395 bp
Guanine Count
1411152 bp
Cytosine Count
1407900 bp
Genome Length
5588627 bp
Protein-coding Genes
5036 genes
Non-Coding Genes
528 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--pyruvate transaminase | C9201_12835 | Not Available | Negative | 2593037 - 2594290 | 46715.9 |
| alpha-amylase | C9201_12840 | Not Available | Negative | 2594468 - 2596498 | 75833.6 |
| protein bax | C9201_12845 | Not Available | Positive | 2596817 - 2597641 | 30869.3 |
| xylr family transcriptional regulator | C9201_12850 | Not Available | Negative | 2597749 - 2598927 | 44871.7 |
| xylose abc transporter permease | C9201_12855 | Not Available | Negative | 2599005 - 2600186 | 41047.5 |
| d-xylose abc transporter atp-binding protein | C9201_12860 | Not Available | Negative | 2600164 - 2601705 | 56443.9 |
| d-xylose-binding periplasmic protein | C9201_12865 | Not Available | Negative | 2601783 - 2602775 | 35722.1 |
| xylose isomerase | C9201_12870 | Not Available | Positive | 2603141 - 2604463 | 49721.7 |
| xylulokinase | C9201_12875 | Not Available | Positive | 2604535 - 2605989 | 52681.4 |
| hypothetical protein | C9201_12880 | Not Available | Positive | 2606158 - 2606499 | 12553.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




