Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0426 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1374360 bp
Thymine Count
1382395 bp
Guanine Count
1411152 bp
Cytosine Count
1407900 bp
Genome Length
5588627 bp
Protein-coding Genes
5036 genes
Non-Coding Genes
528 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | C9201_10745 | Not Available | Positive | 2184490 - 2185473 | 36208.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9201_10750 | Not Available | Positive | 2185449 - 2187059 | 59361.6 |
| thiamine abc transporter atp-binding protein thiq | C9201_10755 | Not Available | Positive | 2187043 - 2187741 | 25011.6 |
| deda family protein | C9201_10760 | Not Available | Negative | 2187855 - 2188619 | 28171.7 |
| arabinose operon regulatory protein | C9201_10765 | Not Available | Negative | 2188705 - 2189583 | 33385.8 |
| ribulokinase | C9201_10770 | Not Available | Positive | 2189922 - 2191622 | 61131.7 |
| l-arabinose isomerase | C9201_10775 | Not Available | Positive | 2191633 - 2193135 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | C9201_10780 | Not Available | Positive | 2193304 - 2193999 | 25548.4 |
| dna polymerase ii | C9201_10785 | Not Available | Positive | 2194074 - 2196425 | 90044.7 |
| rna polymerase-associated protein rapa | C9201_10790 | Not Available | Positive | 2196590 - 2199496 | 109789.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




