Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0423 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327677 bp
Thymine Count
1331023 bp
Guanine Count
1372307 bp
Cytosine Count
1362293 bp
Genome Length
5403282 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
449 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C9198_16650 | Not Available | Negative | 3413211 - 3413756 | 21257.5 |
| trk system potassium uptake protein trkh | C9198_16655 | Not Available | Negative | 3413768 - 3415219 | 52962.9 |
| impact family member yigz | C9198_16660 | Not Available | Negative | 3415258 - 3415872 | 21758.1 |
| xaa-pro dipeptidase | C9198_16665 | Not Available | Negative | 3415872 - 3417203 | 50178.9 |
| fatty acid oxidation complex subunit alpha fadb | C9198_16670 | Not Available | Positive | 3417393 - 3419582 | 79553.5 |
| acetyl-coa c-acyltransferase fada | C9198_16675 | Not Available | Positive | 3419592 - 3420755 | 40853.7 |
| nad(p)h-flavin reductase | C9198_16680 | Not Available | Negative | 3420947 - 3421648 | 26243.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C9198_16685 | Not Available | Negative | 3421694 - 3423187 | 55606.8 |
| transcription/translation regulatory transformer protein rfah | C9198_16690 | Not Available | Positive | 3423354 - 3423842 | 18341.3 |
| tat-linked quality control protein tatd | C9198_16695 | Not Available | Negative | 3423839 - 3424621 | 29061.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




