Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0423 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327677 bp
Thymine Count
1331023 bp
Guanine Count
1372307 bp
Cytosine Count
1362293 bp
Genome Length
5403282 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
449 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | C9198_16445 | Not Available | Positive | 3366643 - 3368994 | 89966.5 |
| rna polymerase-associated protein rapa | C9198_16450 | Not Available | Positive | 3369159 - 3372065 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9198_16455 | Not Available | Positive | 3372077 - 3372736 | 24862.1 |
| co-chaperone djla | C9198_16460 | Not Available | Negative | 3372853 - 3373668 | 30567.2 |
| lps-assembly protein lptd | C9198_16465 | Not Available | Positive | 3373923 - 3376277 | 89675.8 |
| chaperone sura | C9198_16470 | Not Available | Positive | 3376330 - 3377616 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C9198_16475 | Not Available | Positive | 3377616 - 3378605 | 35211.9 |
| ribosomal rna small subunit methyltransferase a | C9198_16480 | Not Available | Positive | 3378602 - 3379423 | 30422.0 |
| co2+/mg2+ efflux protein apag | C9198_16485 | Not Available | Positive | 3379426 - 3379803 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | C9198_16490 | Not Available | Positive | 3379810 - 3380658 | 31512.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




