Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0423 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327677 bp
Thymine Count
1331023 bp
Guanine Count
1372307 bp
Cytosine Count
1362293 bp
Genome Length
5403282 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
449 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase rava | C9198_13765 | Not Available | Negative | 2795950 - 2797446 | 56419.1 |
| low affinity potassium transport system protein kup | C9198_13770 | Not Available | Positive | 2797669 - 2799537 | 69298.3 |
| d-ribose pyranase | C9198_13775 | Not Available | Positive | 2799704 - 2800123 | 15316.5 |
| ribose abc transporter atp-binding protein rbsa | C9198_13780 | Not Available | Positive | 2800131 - 2801636 | 54988.0 |
| ribose abc transporter permease | C9198_13785 | Not Available | Positive | 2801641 - 2802606 | 33468.0 |
| ribose abc transporter substrate-binding protein rbsb | C9198_13790 | Not Available | Positive | 2802631 - 2803521 | 30940.2 |
| ribokinase | C9198_13795 | Not Available | Positive | 2803647 - 2804576 | 32292.4 |
| ribose operon repressor | C9198_13800 | Not Available | Positive | 2804580 - 2805572 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | C9198_13805 | Not Available | Negative | 2805538 - 2806965 | 51462.8 |
| fadr family transcriptional regulator | C9198_13810 | Not Available | Negative | 2806988 - 2807680 | 26063.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




