Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0423 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327677 bp
Thymine Count
1331023 bp
Guanine Count
1372307 bp
Cytosine Count
1362293 bp
Genome Length
5403282 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
449 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9198_13515 | Not Available | Positive | 2745249 - 2745329 | 3111.7 |
| 50s ribosomal protein l34 | C9198_13520 | Not Available | Positive | 2745559 - 2745699 | 5380.74 |
| ribonuclease p protein component | C9198_13525 | Not Available | Positive | 2745716 - 2746075 | 13790.0 |
| membrane protein insertion efficiency factor yidd | C9198_13530 | Not Available | Positive | 2746039 - 2746296 | 9381.61 |
| membrane protein insertase yidc | C9198_13535 | Not Available | Positive | 2746299 - 2747945 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9198_13540 | Not Available | Positive | 2748051 - 2749415 | 49233.8 |
| tryptophanase leader peptide | C9198_13545 | Not Available | Positive | 2749658 - 2749732 | 2894.56 |
| tryptophanase | C9198_13550 | Not Available | Positive | 2749953 - 2751368 | 52776.4 |
| low affinity tryptophan permease tnab | C9198_13555 | Not Available | Positive | 2751504 - 2752706 | 43526.2 |
| multidrug efflux mfs transporter mdtl | C9198_13560 | Not Available | Positive | 2752838 - 2754013 | 41552.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




