Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0423 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327677 bp
Thymine Count
1331023 bp
Guanine Count
1372307 bp
Cytosine Count
1362293 bp
Genome Length
5403282 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
449 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | C9198_13205 | Not Available | Negative | 2687779 - 2689197 | 53719.1 |
| duf1722 domain-containing protein | C9198_13210 | Not Available | Negative | 2689194 - 2689703 | 20198.3 |
| hypothetical protein | C9198_13220 | Not Available | Negative | 2690838 - 2691407 | 21992.6 |
| rhs repeat protein | C9198_13225 | Not Available | Negative | 2691404 - 2691977 | 21329.2 |
| duf905 domain-containing protein | C9198_13230 | Not Available | Positive | 2691978 - 2692113 | 4996.94 |
| duf945 domain-containing protein | C9198_13235 | Not Available | Positive | 2692292 - 2693113 | 31234.5 |
| antirestriction protein | C9198_13240 | Not Available | Positive | 2693113 - 2693358 | 8900.55 |
| antirestriction protein | C9198_13245 | Not Available | Positive | 2693452 - 2693925 | 17864.1 |
| dna repair protein radc | C9198_13250 | Not Available | Positive | 2693941 - 2694417 | 17604.4 |
| duf987 domain-containing protein | C9198_13255 | Not Available | Positive | 2694486 - 2694707 | 8411.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




