Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | C9193_21900 | Not Available | Negative | 4485517 - 4487367 | 71190.0 |
| type vi secretion system baseplate subunit tsse | C9193_21905 | Not Available | Negative | 4487371 - 4487784 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9193_21910 | Not Available | Negative | 4487791 - 4489266 | 55705.0 |
| hypothetical protein | C9193_21915 | Not Available | Negative | 4489317 - 4489541 | 8411.01 |
| type vi secretion system contractile sheath small subunit | C9193_21920 | Not Available | Negative | 4489576 - 4490076 | 18052.4 |
| hcp family type vi secretion system effector | C9193_21925 | Not Available | Positive | 4490773 - 4491291 | 19256.8 |
| type vi secretion system tip protein vgrg | C9193_21930 | Not Available | Positive | 4491501 - 4493642 | 79808.2 |
| type iv secretion protein rhs | C9193_21935 | Not Available | Positive | 4493718 - 4498211 | 166190.0 |
| hypothetical protein | C9193_21940 | Not Available | Positive | 4498213 - 4498470 | 9724.91 |
| glutamate:gamma-aminobutyrate antiporter | C9193_21945 | Not Available | Positive | 4499122 - 4500657 | 55080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




