Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate abc transporter permease | C9193_13895 | Not Available | Negative | 2911014 - 2911688 | 24916.2 |
| amino acid abc transporter permease | C9193_13900 | Not Available | Negative | 2911688 - 2912428 | 27456.2 |
| amino acid abc transporter substrate-binding protein | C9193_13905 | Not Available | Negative | 2912598 - 2913506 | 33422.9 |
| rhomboid family intramembrane serine protease | C9193_13910 | Not Available | Positive | 2913961 - 2915838 | 67653.6 |
| hypothetical protein | C9193_13915 | Not Available | Positive | 2915813 - 2916016 | 7555.0 |
| apolipoprotein n-acyltransferase | C9193_13920 | Not Available | Negative | 2915916 - 2917454 | 56965.9 |
| magnesium and cobalt efflux protein corc | C9193_13925 | Not Available | Negative | 2917479 - 2918357 | 33300.4 |
| endoribonuclease ybey | C9193_13930 | Not Available | Negative | 2918447 - 2918914 | 17526.6 |
| phoh family protein | C9193_13935 | Not Available | Negative | 2918911 - 2919990 | 40656.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | C9193_13940 | Not Available | Negative | 2920104 - 2921528 | 53666.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




