Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anion permease | C9193_13695 | Not Available | Negative | 2870872 - 2872335 | 53095.7 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | C9193_13700 | Not Available | Negative | 2872386 - 2873264 | 31646.4 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | C9193_13705 | Not Available | Negative | 2873239 - 2873790 | 20271.5 |
| citrate lyase subunit alpha | C9193_13710 | Not Available | Negative | 2873794 - 2875326 | 55194.0 |
| citrate lyase subunit beta | C9193_13715 | Not Available | Negative | 2875337 - 2876245 | 33111.6 |
| citrate lyase acyl carrier protein | C9193_13720 | Not Available | Negative | 2876242 - 2876538 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | C9193_13725 | Not Available | Negative | 2876553 - 2877611 | 40095.5 |
| sensor histidine kinase dpib | C9193_13730 | Not Available | Positive | 2877991 - 2879649 | 61659.7 |
| two-component response regulator | C9193_13735 | Not Available | Positive | 2879618 - 2880298 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | C9193_13740 | Not Available | Negative | 2880339 - 2881724 | 48473.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




