Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | C9193_13640 | Not Available | Positive | 2859415 - 2860575 | 43065.3 |
| hypothetical protein | C9193_13645 | Not Available | Negative | 2860576 - 2861205 | 23926.8 |
| lysr family transcriptional regulator | C9193_13655 | Not Available | Negative | 2862545 - 2863447 | 34354.8 |
| thiol:disulfide interchange protein dsbg | C9193_13660 | Not Available | Negative | 2863656 - 2864402 | 27469.5 |
| alkyl hydroperoxide reductase subunit c | C9193_13665 | Not Available | Positive | 2864774 - 2865337 | 20762.5 |
| alkyl hydroperoxide reductase subunit f | C9193_13670 | Not Available | Positive | 2865508 - 2867073 | 56180.4 |
| universal stress protein uspg | C9193_13675 | Not Available | Negative | 2867194 - 2867622 | 15937.1 |
| glutathione-dependent formaldehyde dehydrogenase | C9193_13680 | Not Available | Positive | 2867843 - 2869081 | 44225.2 |
| nucleoside diphosphate kinase regulator | C9193_13685 | Not Available | Negative | 2869312 - 2869722 | 14928.0 |
| ribonuclease i | C9193_13690 | Not Available | Negative | 2869952 - 2870758 | 29647.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




