Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | C9193_13430 | Not Available | Negative | 2808845 - 2810299 | 53997.9 |
| shikimate transporter | C9193_13435 | Not Available | Negative | 2810401 - 2811717 | 47817.2 |
| lipopolysaccharide heptosyltransferase family protein | C9193_13440 | Not Available | Positive | 2812032 - 2813084 | 39481.4 |
| type iv secretion protein rhs | C9193_13450 | Not Available | Negative | 2813569 - 2817075 | 129333.0 |
| duf1795 domain-containing protein | C9193_13455 | Not Available | Negative | 2817095 - 2817556 | 17319.4 |
| type vi secretion system tip protein vgrg | C9193_13460 | Not Available | Negative | 2817584 - 2819485 | 71378.0 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9193_13465 | Not Available | Negative | 2820222 - 2821670 | 54117.6 |
| copper response regulator transcription factor cusr | C9193_13470 | Not Available | Negative | 2821660 - 2822343 | 25428.2 |
| efflux transporter outer membrane subunit | C9193_13475 | Not Available | Positive | 2822500 - 2823882 | 50714.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | C9193_13480 | Not Available | Positive | 2823906 - 2824238 | 12281.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




