Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | C9193_13020 | Not Available | Positive | 2725351 - 2725410 | 2232.03 |
| vwa domain-containing protein | C9193_13025 | Not Available | Positive | 2725631 - 2726290 | 24191.9 |
| protein phosphatase 2c domain-containing protein | C9193_13030 | Not Available | Positive | 2726287 - 2727048 | 27337.7 |
| helix-hairpin-helix domain-containing protein | C9193_13035 | Not Available | Positive | 2727045 - 2728985 | 71362.4 |
| molecular chaperone | C9193_13040 | Not Available | Negative | 2728997 - 2730349 | 49278.1 |
| dna-3-methyladenine glycosylase 2 | C9193_13045 | Not Available | Positive | 2730483 - 2731340 | 31708.4 |
| diguanylate cyclase | C9193_13050 | Not Available | Negative | 2731379 - 2734696 | 123932.0 |
| uridine kinase | C9193_13055 | Not Available | Positive | 2735014 - 2735655 | 24354.6 |
| dctp deaminase | C9193_13060 | Not Available | Positive | 2735747 - 2736328 | 21222.4 |
| outer membrane assembly protein asma | C9193_13065 | Not Available | Positive | 2736350 - 2738203 | 68966.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




