Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | C9193_12820 | Not Available | Negative | 2683222 - 2685255 | 76244.9 |
| protein mrp | C9193_12825 | Not Available | Positive | 2685387 - 2686496 | 39940.4 |
| duf2574 family protein | C9193_12830 | Not Available | Positive | 2686759 - 2687040 | 10164.1 |
| type 1 fimbrial protein | C9193_12835 | Not Available | Positive | 2687333 - 2687875 | 19075.6 |
| fimbrial assembly protein | C9193_12840 | Not Available | Positive | 2687955 - 2688629 | 24864.4 |
| fimbrial biogenesis outer membrane usher protein | C9193_12845 | Not Available | Positive | 2688645 - 2691125 | 92345.1 |
| putative fimbrial-like adhesin protein | C9193_12850 | Not Available | Positive | 2691141 - 2692175 | 36973.0 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | C9193_12855 | Not Available | Negative | 2692257 - 2692595 | 12466.8 |
| nickel/cobalt efflux protein rcna | C9193_12860 | Not Available | Negative | 2692814 - 2693638 | 30470.2 |
| transcriptional regulator | C9193_12865 | Not Available | Positive | 2693759 - 2694031 | 10134.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




