Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1245845 bp
Thymine Count
1245298 bp
Guanine Count
1274282 bp
Cytosine Count
1287477 bp
Genome Length
5059722 bp
Protein-coding Genes
4588 genes
Non-Coding Genes
348 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(20/20a) synthase dusa | C9193_12540 | Not Available | Negative | 2612116 - 2613153 | 38470.1 |
| duf2713 family protein | C9193_12545 | Not Available | Negative | 2613517 - 2614230 | 26863.6 |
| hypothetical protein | C9193_12550 | Not Available | Negative | 2614254 - 2614508 | 9749.9 |
| zinc uptake transcriptional repressor zur | C9193_12555 | Not Available | Positive | 2614826 - 2615341 | 19255.2 |
| csbd family protein | C9193_12560 | Not Available | Negative | 2615383 - 2615592 | 8325.67 |
| mate family efflux transporter dinf | C9193_12565 | Not Available | Negative | 2615708 - 2617033 | 47677.9 |
| lexa repressor | C9193_12570 | Not Available | Negative | 2617106 - 2617714 | 22359.1 |
| diacylglycerol kinase | C9193_12575 | Not Available | Negative | 2617824 - 2618192 | 13245.4 |
| glycerol-3-phosphate 1-o-acyltransferase | C9193_12580 | Not Available | Positive | 2618363 - 2620786 | 91386.9 |
| 4-hydroxybenzoate octaprenyltransferase | C9193_12585 | Not Available | Negative | 2620941 - 2621813 | 32513.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




