Escherichia coli strain FWSEC0415

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0415 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is mesophilic, with an optimal growth temperature of 37°C. FWSEC0415 has a single replicon and is characterized by a double membrane structure. This strain is host-associated and has a diverse range of potential hosts, including Homo sapiens, various livestock species such as Bos taurus and Sus scrofa, several species of birds, and even plants like Solanum lycopersicum. Its biotic relationship is described as free-living, indicating its ability to exist independently in various environments. FWSEC0415 is notable for its pathogenic potential in humans, being associated with numerous health complications. These include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various forms of diarrhea, including hemorrhagic colitis and hemolytic uremic syndrome. It can also contribute to severe health issues such as septicemia and renal failure. The ecological insight here is that the diverse host range of E. coli strain FWSEC0415 suggests it may play significant roles in both human health and the health of various animal species, potentially influencing the dynamics of microbial communities in its environments. Its pathogenicity in humans underscores the importance of monitoring and understanding this strain, especially in relation to food safety and public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0415

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0415
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0415 plasmid unnamed3

Gene Summary

Adenine Count

1332740 bp

Thymine Count

1329596 bp

Guanine Count

1339866 bp

Cytosine Count

1342292 bp

Genome Length

5353714 bp

Protein-coding Genes

4873 genes

Non-Coding Genes

405 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t3ss effector protein nledC9190_04130Not AvailableNegative922408 - 92310625962.6
hypotheticalC9190_04135Not AvailableNegative923168 - 9232894388.53
Hypothetical proteinC9190_04140Not AvailableNegative923337 - 92421832406.1
Tail fiber assembly proteinC9190_04145Not AvailableNegative924388 - 9245495858.94
hypotheticalC9190_04150Not AvailablePositive924822 - 9249263973.59
type iii secretion system effector zinc metalloprotease nlecC9190_04155Not AvailableNegative925046 - 92606538258.2
Hypothetical proteinC9190_04160Not AvailableNegative926099 - 92707938058.2
Tail fiber proteinC9190_04165Not AvailableNegative927256 - 9275259888.06
Putative tail fiber proteinC9190_04170Not AvailableNegative927527 - 92881943494.5
Putative outer membrane protein lom precursorC9190_04175Not AvailableNegative928884 - 92948321740.1

Displaying genes 1 – 10 of 5279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total