Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | C9190_14125 | Not Available | Negative | 2983601 - 2984713 | 40478.6 |
| penicillin-binding protein 2 | C9190_14130 | Not Available | Negative | 2984716 - 2986617 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9190_14135 | Not Available | Negative | 2986648 - 2987115 | 17342.1 |
| ribosome silencing factor | C9190_14140 | Not Available | Negative | 2987119 - 2987436 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | C9190_14145 | Not Available | Negative | 2987696 - 2988307 | 23386.8 |
| nicotinate-nucleotide adenylyltransferase | C9190_14150 | Not Available | Negative | 2988331 - 2988972 | 24515.3 |
| dna polymerase iii subunit delta | C9190_14155 | Not Available | Negative | 2988974 - 2990005 | 38732.0 |
| lps assembly lipoprotein lpte | C9190_14160 | Not Available | Negative | 2990005 - 2990586 | 21319.7 |
| leucine--trna ligase | C9190_14165 | Not Available | Negative | 2990601 - 2993183 | 97239.0 |
| zinc ribbon-containing protein | C9190_14170 | Not Available | Positive | 2993419 - 2993901 | 18798.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





