Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | C9190_12850 | Not Available | Negative | 2726158 - 2727786 | 60432.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | C9190_12855 | Not Available | Negative | 2727994 - 2730621 | 96983.3 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | C9190_12860 | Not Available | Positive | 2730768 - 2731490 | 26587.0 |
| aida-i family autotransporter yfal | C9190_12865 | Not Available | Negative | 2731631 - 2735383 | 131375.0 |
| ribonucleoside-diphosphate reductase subunit alpha | C9190_12870 | Not Available | Positive | 2736079 - 2738364 | 85703.9 |
| ribonucleoside-diphosphate reductase 1 subunit beta | C9190_12875 | Not Available | Positive | 2738591 - 2739721 | 43519.6 |
| 2fe-2s ferredoxin-like protein | C9190_12880 | Not Available | Positive | 2739721 - 2739975 | 9275.25 |
| lipopolysaccharide kinase inaa | C9190_12885 | Not Available | Negative | 2740029 - 2740679 | 25285.5 |
| mfs transporter | C9190_12890 | Not Available | Negative | 2740760 - 2741950 | 42908.2 |
| lysr family transcriptional regulator | C9190_12895 | Not Available | Positive | 2742102 - 2742980 | 32670.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





