Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | C9190_12790 | Not Available | Negative | 2705389 - 2707032 | 61584.5 |
| dna oxidative demethylase alkb | C9190_12795 | Not Available | Negative | 2707108 - 2707758 | 24064.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C9190_12800 | Not Available | Negative | 2707758 - 2708822 | 39234.7 |
| fad:protein fmn transferase apbe | C9190_12805 | Not Available | Negative | 2708896 - 2709951 | 38551.0 |
| porin ompc | C9190_12810 | Not Available | Negative | 2710063 - 2711166 | 40510.5 |
| phosphotransferase rcsd | C9190_12815 | Not Available | Positive | 2711905 - 2714577 | 100367.0 |
| transcriptional regulator rcsb | C9190_12820 | Not Available | Positive | 2714594 - 2715244 | 23672.0 |
| two-component system sensor histidine kinase rcsc | C9190_12825 | Not Available | Negative | 2715444 - 2718293 | 106530.0 |
| duf2135 domain-containing protein | C9190_12830 | Not Available | Negative | 2718568 - 2719344 | 28291.2 |
| duf1175 domain-containing protein | C9190_12845 | Not Available | Negative | 2725538 - 2726161 | 23768.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





