Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfa family protein | C9190_12190 | Not Available | Positive | 2595809 - 2596135 | 11974.3 |
| starvation-sensing protein | C9190_12195 | Not Available | Positive | 2596308 - 2596433 | 4675.74 |
| dna-binding protein | C9190_12205 | Not Available | Negative | 2597124 - 2597360 | 9183.07 |
| hypothetical protein | C9190_12210 | Not Available | Negative | 2597448 - 2597567 | 4418.11 |
| abc transporter permease | C9190_12355 | Not Available | Negative | 2611702 - 2612859 | 41206.3 |
| abc transporter substrate-binding protein | C9190_12360 | Not Available | Negative | 2612866 - 2613783 | 32709.1 |
| beta-glucosidase bglx | C9190_12365 | Not Available | Negative | 2614035 - 2616332 | 83492.8 |
| d-lactate dehydrogenase | C9190_12370 | Not Available | Positive | 2616528 - 2618243 | 64689.0 |
| d-alanyl-d-alanine endopeptidase | C9190_12375 | Not Available | Negative | 2618281 - 2619213 | 33855.3 |
| yip1 family protein | C9190_12380 | Not Available | Negative | 2619387 - 2619974 | 21707.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





