Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shet2/espl2 family type iii secretion system effector toxin | C9190_11470 | Not Available | Negative | 2446676 - 2448574 | 70795.9 |
| threonine--trna ligase | C9190_11475 | Not Available | Positive | 2449097 - 2451025 | 74032.5 |
| translation initiation factor if-3 | C9190_11480 | Not Available | Positive | 2451029 - 2451571 | 20565.2 |
| 50s ribosomal protein l35 | C9190_11485 | Not Available | Positive | 2451668 - 2451865 | 7289.38 |
| 50s ribosomal protein l20 | C9190_11490 | Not Available | Positive | 2451918 - 2452274 | 13497.7 |
| phest operon leader peptide phem | C9190_11495 | Not Available | Positive | 2452401 - 2452535 | 5349.58 |
| phenylalanine--trna ligase subunit alpha | C9190_11500 | Not Available | Positive | 2452724 - 2453707 | 36803.9 |
| phenylalanine--trna ligase subunit beta | C9190_11505 | Not Available | Positive | 2453722 - 2456109 | 87437.2 |
| integration host factor subunit alpha | C9190_11510 | Not Available | Positive | 2456114 - 2456413 | 11354.6 |
| vitamin b12 import system permease btuc | C9190_11515 | Not Available | Positive | 2456514 - 2457494 | 34941.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





